Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919513.1_cds_XP_016468708.1_61316
CDS Infomation

[gene=LOC107791205] [db_xref=GeneID:107791205] [protein=cycloartenol synthase-like] [protein_id=XP_016468708.1] [location=complement(join(3818..3895,4124..4204,4500..4680,4962..5105,5743..5786,5906..5962,6263..6361,6469..6591,6676..6798,7459..7572,22123..22311,22611..22777,22866..22950,23434..23622,23708..23797,24451..24636,24728..24925))] [gbkey=CDS]
Sequence

ATGTGGAAACTTAAACTCTCAGAGGGAAACGAACCGTGGGTTACAAGTTTGAACAATCAC
GTTGGTAGGCAATATTGGGAATTCGATAAAAATGGTGGTACGCTTGAAGAACGATGTCAT
GTTGAAAATATTCGTCAACATTTTTATGAGAATCGGTTTCATGTCAAACACAGTTCTGAT
CTCCTATTGAGACTTCAGTTTGAAAAAGAGAAGAAAGTTGATATGAAGTTGGGAAAAGTG
AAAATAGAGAGTGAAGAAGAAATAAGTGAAGAGGCAGTGAAGACAACATTGAGAAGGGCA
TTAAGATTCTATTCAACACTTCAGGCTGAGGATGGACATTGGCCTGCTGATTATGGTGGT
CCTTTGTTCCTTTTGCCTGGCTTGGTTATATGTTTATACATAATGGGAGTGGTGAATGCA
GTGTTATCAGAAGAGCATCAAAAGGAAATACTTCGTTACTTATATAATCATCAGAACGTA
GATGGAGGGTGGGGGTTGCATATAGAAGGACATAGCACCATGTTTTGCACTGCTCTCAAC
TATGTGACTTTAAGACTACTTGGAGAAGACATAAATGATGAAGCTATGGAGAAAGCAAGA
AAATGGATTCTTGAACATGGTGGTCTCACCTTTATTCCTTCTTGGGGAAAACTCTGGCTC
TCTGCACTAGGGGTATACGAATGGAGTGGCAATAATCCATTACCACCAGAACTATGGCTT
CTCCCCTACTTTCTTCCTATACATCCAGGTCGAATGTGGTGTCACTGTCGAATGGTGTAT
TTAGCAATGTCATACTTGTATGGGACAAGATATGTAGGTCCTATTAATTCCACTATTTTA
TCACTCAGAAGAGAGCTCTATACATGTCCCTATCACCACATTGATTGGGACTTGGCCAGA
AACCAATGCGCTAAGGAAGATTTGTACTACCCTCATCCTCTAGTACAAGACATTCTTTGG
GAAGGTCTTCACAAATTTGCAGAACCACTTCTCATGCAATGGCCATTCTCCAAGCTAAGA
AAAAGGGCACTCAGCATTGTGATGGAACATATTCATTTTGAGGATGAAAATACCAACTAT
ATTTGTATTGGACCTGTCAATAAGGTATTGAACATGCTGTGTTGTTGGGTAGAGGATCCA
GAATCCAAGGCAATCAAACTTCATCTCTCCAGAATCAAAGACTATCTATGGCTCGCTGAA
GATGGCATGAAAATGAAGGGATATAATGGGAGTCAACTGTGGGATGTTAGTTTTGGCGTA
CAAGCGATACTATCTACAAACCTTCCTGAGGAATACGGTTGGATGCTTAAGAAGGCACAC
CACTTCATTAAAGCCTCACAGGTTAGAGAAGACAGTAGTGGAGACCTTACGAAATGGTAT
AGGCAGAGTTGTAGAGGTGGATGGCCCTTCTCCACTGTCGACAATGGTTGGATTGTATCA
GATTGCACTGCTGAAGCCCTTAAGACAGCAGTTTTGCTATCTCAGATGCCATCTGGCATT
GTTGGAGAAGCAATAGCACCTCACAAGCTATGGGATGCTGTTGATTTGCTTCTTTCTCTT
CAGAATAGCAATGGCGGGTTTGCTTCGTATGAGCTAACAAGATCTTATGCATGGCTTGAG
ATTAATCCATCAGAAACATTTGGGGATATCACCATTGATTACCAGTATGTAGAATGTACT
TCTGCAGCAATTCAAGCTCTTCAGTCCTTCAAAAAACTTAACCCGAAATATCGAGAGAAA
GAAATAGGAGCTTGTATTAAAAAAGCTCTCAGTTTCATCGAAAGTATTCAACTTCCTGAT
GGCTCATGGTATGGCTCGTGGGGAGTGTGCTACACATATGGAACATGGTTTGGGATAAGT
GGGCTAATTGCTGGTGGCAAGACTTACGAAAGCTGCCAAAGCATCAGAAAGGCTTGTCAT
TTTCTATTATCTAAACAACTTCAACCTTCTGGTGGTTGGGGTGAAAGCTATCTCTCATCT
CAGCACAAGGTTTATACGAACATTGATGGGAACAAATCACACATTGTAAACACCGCATGG
GCCATGTTGGCTCTTATTGAAGCTGGCCAGGGGAAAAGAGATCCTACTCCACTCCAACAA
GCTGCTAAAGTGCTGATAAATTCTCAAATGGANCTTTGTCCACTTTGA

Peptide Sequence

PEP ID

XP_016468708.1
PEP Infomation

PREDICTED: cycloartenol synthase-like [Nicotiana tabacum]
Sequence

MWKLKLSEGNEPWVTSLNNHVGRQYWEFDKNGGTLEERCHVENIRQHFYENRFHVKHSSD
LLLRLQFEKEKKVDMKLGKVKIESEEEISEEAVKTTLRRALRFYSTLQAEDGHWPADYGG
PLFLLPGLVICLYIMGVVNAVLSEEHQKEILRYLYNHQNVDGGWGLHIEGHSTMFCTALN
YVTLRLLGEDINDEAMEKARKWILEHGGLTFIPSWGKLWLSALGVYEWSGNNPLPPELWL
LPYFLPIHPGRMWCHCRMVYLAMSYLYGTRYVGPINSTILSLRRELYTCPYHHIDWDLAR
NQCAKEDLYYPHPLVQDILWEGLHKFAEPLLMQWPFSKLRKRALSIVMEHIHFEDENTNY
ICIGPVNKVLNMLCCWVEDPESKAIKLHLSRIKDYLWLAEDGMKMKGYNGSQLWDVSFGV
QAILSTNLPEEYGWMLKKAHHFIKASQVREDSSGDLTKWYRQSCRGGWPFSTVDNGWIVS
DCTAEALKTAVLLSQMPSGIVGEAIAPHKLWDAVDLLLSLQNSNGGFASYELTRSYAWLE
INPSETFGDITIDYQYVECTSAAIQALQSFKKLNPKYREKEIGACIKKALSFIESIQLPD
GSWYGSWGVCYTYGTWFGISGLIAGGKTYESCQSIRKACHFLLSKQLQPSGGWGESYLSS
QHKVYTNIDGNKSHIVNTAWAMLALIEAGQGKRDPTPLQQAAKVLINSQMXLCPL

Transcript Sequence

Gene sequence data has not been registered.